Due to a problem in the Quartus® II software version 11.1 SP2 and earlier, the Design Assistant may report an R101 warning on the following node when you run the Design Assistant on a design containing the Parallel Flash Loader:<Instance name>|altparallel_flash_loader:altparallel_flash_loader_component|alt_pfl:\PFL_CFI:pfl_cfi_inst|alt_pfl_cfg2:\CFG1:cfg|alt_pfl_cfg_flash_intel_burst:alt_pfl_cfg_flash_intel_burst|comb~4
The warning can safely be ignored.
The problem is fixed beginning with the Quartus II software version 12.0.